Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc1bQ920F6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm29310-201ENSMUST00000185468 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21825-201ENSMUST00000185728 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm29109-201ENSMUST00000185895 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21896-201ENSMUST00000186520 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21873-201ENSMUST00000186728 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21794-201ENSMUST00000187056 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21880-201ENSMUST00000187275 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21826-201ENSMUST00000187451 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21198-201ENSMUST00000188393 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21749-201ENSMUST00000189343 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21901-201ENSMUST00000189568 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm29424-201ENSMUST00000189716 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm28599-201ENSMUST00000189838 694 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21867-201ENSMUST00000189917 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm29269-201ENSMUST00000190087 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21722-201ENSMUST00000190153 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm28423-201ENSMUST00000190701 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21899-201ENSMUST00000190745 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21910-201ENSMUST00000191163 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21849-201ENSMUST00000191571 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm28678-201ENSMUST00000191593 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm20910-201ENSMUST00000193268 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gm21871-201ENSMUST00000194621 696 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.22■□□□□ 0.19
Smc1bQ920F6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc1bQ920F6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Gm27631-201ENSMUST00000184163 466 ntBASIC16.21■□□□□ 0.19
Smc1bQ920F6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Gm9229-201ENSMUST00000222777 126 ntBASIC16.21■□□□□ 0.19
Smc1bQ920F6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc1bQ920F6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.21■□□□□ 0.18
Smc1bQ920F6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc1bQ920F6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc1bQ920F6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc1bQ920F6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc1bQ920F6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Gm11425-201ENSMUST00000119608 498 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms