Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Dupd1-202ENSMUST00000224735 548 ntBASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdha3Q91Y16 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha3Q91Y16 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha3Q91Y16 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdha3Q91Y16 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Pcdha3Q91Y16 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Gm8584-201ENSMUST00000171982 758 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Gm44344-201ENSMUST00000200287 129 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Gm16476-201ENSMUST00000221544 139 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdha3Q91Y16 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Gm13223-201ENSMUST00000118609 747 ntBASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha3Q91Y16 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm12882-201ENSMUST00000121696 517 ntBASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms