Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Pcdhb1Q91Y08 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gm15653-201ENSMUST00000119247 907 ntBASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gm25948-201ENSMUST00000175334 112 ntBASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gm25144-201ENSMUST00000179561 110 ntBASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gm25352-201ENSMUST00000179815 110 ntBASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb1Q91Y08 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Mir1897-201ENSMUST00000122581 272 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Gm27533-201ENSMUST00000183800 152 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Gm27430-201ENSMUST00000184585 107 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Gm37714-201ENSMUST00000194742 342 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Gm44333-201ENSMUST00000197168 107 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Shd-206ENSMUST00000225145 998 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb1Q91Y08 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Gm2445-201ENSMUST00000182798 989 ntBASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms