Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lims2Q91XD2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lims2Q91XD2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.29□□□□□ -0.12
Lims2Q91XD2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.29□□□□□ -0.12
Lims2Q91XD2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lims2Q91XD2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.28□□□□□ -0.12
Lims2Q91XD2 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.28□□□□□ -0.12
Lims2Q91XD2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.28□□□□□ -0.12
Lims2Q91XD2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims2Q91XD2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.27□□□□□ -0.12
Lims2Q91XD2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lims2Q91XD2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.27□□□□□ -0.13
Lims2Q91XD2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.27□□□□□ -0.13
Lims2Q91XD2 Gm5161-201ENSMUST00000075243 853 ntBASIC14.27□□□□□ -0.13
Lims2Q91XD2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims2Q91XD2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.26□□□□□ -0.13
Lims2Q91XD2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims2Q91XD2 Gm15678-201ENSMUST00000117573 960 ntBASIC14.26□□□□□ -0.13
Lims2Q91XD2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.26□□□□□ -0.13
Lims2Q91XD2 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.26□□□□□ -0.13
Lims2Q91XD2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.26□□□□□ -0.13
Lims2Q91XD2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms