Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.92□□□□□ -0.02
TraipQ8VIG6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TraipQ8VIG6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.91□□□□□ -0.02
TraipQ8VIG6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.91□□□□□ -0.02
TraipQ8VIG6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.91□□□□□ -0.02
TraipQ8VIG6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TraipQ8VIG6 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Gm14716-201ENSMUST00000120138 718 ntBASIC14.9□□□□□ -0.02
TraipQ8VIG6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Gm17794-201ENSMUST00000220252 955 ntBASIC14.9□□□□□ -0.02
TraipQ8VIG6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms