Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps4aQ8VEJ9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gm16198-201ENSMUST00000118766 670 ntBASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps4aQ8VEJ9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Rpph1-201ENSMUST00000175096 319 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm20553-201ENSMUST00000204205 844 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Vps4aQ8VEJ9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms