Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpa1Q8VEE4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpa1Q8VEE4 Rubie-203ENSMUST00000227803 2430 ntBASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Rps4l-201ENSMUST00000071745 943 ntBASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpa1Q8VEE4 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Gm37230-201ENSMUST00000194491 818 ntBASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa1Q8VEE4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms