Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps39Q8R5L3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps39Q8R5L3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vps39Q8R5L3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 AA619741-201ENSMUST00000195095 646 ntBASIC14.08□□□□□ -0.16
Vps39Q8R5L3 AW822252-206ENSMUST00000208904 237 ntBASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps39Q8R5L3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm27525-201ENSMUST00000184465 107 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps39Q8R5L3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.06□□□□□ -0.16
Vps39Q8R5L3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps39Q8R5L3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms