Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.64□□□□□ -0.23
Cdt1Q8R4E9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdt1Q8R4E9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm6912-201ENSMUST00000117218 544 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm15321-201ENSMUST00000121290 288 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm23984-201ENSMUST00000157139 203 ntBASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdt1Q8R4E9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdt1Q8R4E9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdt1Q8R4E9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdt1Q8R4E9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms