Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Gm27430-201ENSMUST00000184585 107 ntBASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Gm44333-201ENSMUST00000197168 107 ntBASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Atf7Q8R0S1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.58■□□□□ 0.25
Atf7Q8R0S1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atf7Q8R0S1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atf7Q8R0S1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Gm2445-201ENSMUST00000182798 989 ntBASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.58■□□□□ 0.24
Atf7Q8R0S1 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atf7Q8R0S1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Gm22175-201ENSMUST00000175007 78 ntBASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Gm33320-201ENSMUST00000192232 530 ntBASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Atf7Q8R0S1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Gm27618-201ENSMUST00000183671 60 ntBASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms