Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.29□□□□□ -0.28
Clrn1Q8K445 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn1Q8K445 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Gm27622-201ENSMUST00000183779 60 ntBASIC13.28□□□□□ -0.28
Clrn1Q8K445 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clrn1Q8K445 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clrn1Q8K445 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clrn1Q8K445 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clrn1Q8K445 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clrn1Q8K445 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.27□□□□□ -0.28
Clrn1Q8K445 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.27□□□□□ -0.29
Clrn1Q8K445 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clrn1Q8K445 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Mir1897-201ENSMUST00000122581 272 ntBASIC13.26□□□□□ -0.29
Clrn1Q8K445 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gm16476-201ENSMUST00000221544 139 ntBASIC13.26□□□□□ -0.29
Clrn1Q8K445 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.26□□□□□ -0.29
Clrn1Q8K445 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms