Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Gm43935-201ENSMUST00000203569 1050 ntBASIC8.84□□□□□ -0.99
Cystm1Q8K353 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Gm18622-201ENSMUST00000219361 595 ntBASIC8.84□□□□□ -0.99
Cystm1Q8K353 Celf4-206ENSMUST00000224553 1729 ntBASIC8.84□□□□□ -0.99
Cystm1Q8K353 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC8.84□□□□□ -0.99
Cystm1Q8K353 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cystm1Q8K353 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cystm1Q8K353 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -1
Cystm1Q8K353 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm13036-201ENSMUST00000117799 748 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 Gm6184-201ENSMUST00000120403 1261 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC8.83□□□□□ -1
Cystm1Q8K353 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm2756-201ENSMUST00000195851 400 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 Gm2213-201ENSMUST00000197485 688 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm5364-201ENSMUST00000216789 889 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cystm1Q8K353 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Cystm1Q8K353 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.83□□□□□ -1
Cystm1Q8K353 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms