Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm29741-201ENSMUST00000192667 421 ntBASIC13.44□□□□□ -0.26
CroccQ8CJ40 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Mir497b-201ENSMUST00000093601 125 ntBASIC13.44□□□□□ -0.26
CroccQ8CJ40 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.44□□□□□ -0.26
CroccQ8CJ40 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CroccQ8CJ40 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Mir1897-201ENSMUST00000122581 272 ntBASIC13.43□□□□□ -0.26
CroccQ8CJ40 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.43□□□□□ -0.26
CroccQ8CJ40 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CroccQ8CJ40 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gm3436-201ENSMUST00000179930 840 ntBASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gm10766-202ENSMUST00000194123 606 ntBASIC13.42□□□□□ -0.26
CroccQ8CJ40 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CroccQ8CJ40 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CroccQ8CJ40 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CroccQ8CJ40 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms