Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopaQ8CIE6 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.37□□□□□ -0.11
CopaQ8CIE6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm27437-201ENSMUST00000183429 107 ntBASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm27533-201ENSMUST00000183800 152 ntBASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopaQ8CIE6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.36□□□□□ -0.11
CopaQ8CIE6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Gm13464-201ENSMUST00000119418 935 ntBASIC14.36□□□□□ -0.11
CopaQ8CIE6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopaQ8CIE6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Gm14767-201ENSMUST00000121559 586 ntBASIC14.35□□□□□ -0.11
CopaQ8CIE6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Mir7684-201ENSMUST00000183858 60 ntBASIC14.35□□□□□ -0.11
CopaQ8CIE6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Gm9063-201ENSMUST00000223299 582 ntBASIC14.35□□□□□ -0.11
CopaQ8CIE6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopaQ8CIE6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms