Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm5479-201ENSMUST00000160578 435 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Mir6956-201ENSMUST00000183598 62 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm44872-201ENSMUST00000207864 420 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.19□□□□□ -0.14
Clip4Q8CI96 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clip4Q8CI96 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gm8749-201ENSMUST00000117737 331 ntBASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gm9824-201ENSMUST00000178707 561 ntBASIC14.18□□□□□ -0.14
Clip4Q8CI96 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.18□□□□□ -0.14
Clip4Q8CI96 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.18□□□□□ -0.14
Clip4Q8CI96 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.18□□□□□ -0.14
Clip4Q8CI96 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clip4Q8CI96 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip4Q8CI96 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.17□□□□□ -0.14
Clip4Q8CI96 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip4Q8CI96 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms