Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Uba3Q8C878 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Uba3Q8C878 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.79□□□□□ -0.04
Uba3Q8C878 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.79□□□□□ -0.04
Uba3Q8C878 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Gm18027-201ENSMUST00000218947 619 ntBASIC14.79□□□□□ -0.04
Uba3Q8C878 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Uba3Q8C878 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Uba3Q8C878 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm4875-201ENSMUST00000118257 786 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.78□□□□□ -0.04
Uba3Q8C878 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.78□□□□□ -0.04
Uba3Q8C878 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm3436-201ENSMUST00000179930 840 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm37714-201ENSMUST00000194742 342 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Uba3Q8C878 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Uba3Q8C878 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.78□□□□□ -0.04
Uba3Q8C878 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.78□□□□□ -0.04
Uba3Q8C878 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms