Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim4Q8C1Q6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Smim4Q8C1Q6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim4Q8C1Q6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim4Q8C1Q6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim4Q8C1Q6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms