Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps9d1Q8C190 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps9d1Q8C190 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Gm5479-201ENSMUST00000160578 435 ntBASIC13.16□□□□□ -0.3
Vps9d1Q8C190 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Gm5177-201ENSMUST00000183092 997 ntBASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms