Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap1Q8BTW8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Gm9794-201ENSMUST00000202370 423 ntBASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap1Q8BTW8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap1Q8BTW8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Gm14928-201ENSMUST00000120198 477 ntBASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Gm18018-201ENSMUST00000198273 408 ntBASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap1Q8BTW8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap1Q8BTW8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms