Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpne3Q8BT60 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpne3Q8BT60 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cpne3Q8BT60 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpne3Q8BT60 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpne3Q8BT60 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Cpne3Q8BT60 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Gm18737-201ENSMUST00000173594 937 ntBASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms