Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm11780-201ENSMUST00000136880 516 ntBASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm4535-201ENSMUST00000182274 558 ntBASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.57□□□□□ -0.56
Smco3Q8BQM7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Gm10355-201ENSMUST00000097146 517 ntBASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco3Q8BQM7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco3Q8BQM7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Grk6-205ENSMUST00000224653 2976 ntBASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.55□□□□□ -0.56
Smco3Q8BQM7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms