Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf38Q8BI21 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm15427-201ENSMUST00000117288 531 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm17271-201ENSMUST00000165535 355 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm10175-201ENSMUST00000086013 645 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf38Q8BI21 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf38Q8BI21 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf38Q8BI21 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms