Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Depdc1bQ8BH88 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm8584-201ENSMUST00000171982 758 ntBASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Depdc1bQ8BH88 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm13223-201ENSMUST00000118609 747 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm13015-201ENSMUST00000118674 204 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm25144-201ENSMUST00000179561 110 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm25352-201ENSMUST00000179815 110 ntBASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms