Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Samm50Q8BGH2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Samm50Q8BGH2 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Gm15920-201ENSMUST00000118998 402 ntBASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Gm14042-201ENSMUST00000120139 833 ntBASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Mir6956-201ENSMUST00000183598 62 ntBASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Samm50Q8BGH2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Gm9824-201ENSMUST00000178707 561 ntBASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.48■□□□□ 0.23
Samm50Q8BGH2 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Samm50Q8BGH2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Samm50Q8BGH2 Gm5479-201ENSMUST00000160578 435 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms