Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm10012-201ENSMUST00000078252 192 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Gm6091-201ENSMUST00000098307 165 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Usp6nlQ80XC3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm27772-201ENSMUST00000184900 187 ntBASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm37424-201ENSMUST00000191727 561 ntBASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Gm45331-201ENSMUST00000209868 554 ntBASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Usp6nlQ80XC3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Usp6nlQ80XC3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.46■□□□□ 0.06
Usp6nlQ80XC3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Usp6nlQ80XC3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Usp6nlQ80XC3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Usp6nlQ80XC3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm27847-201ENSMUST00000183711 107 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm27375-201ENSMUST00000183799 107 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm29127-201ENSMUST00000188304 517 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.45■□□□□ 0.06
Usp6nlQ80XC3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms