Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm11543-201ENSMUST00000120758 370 ntBASIC14.12□□□□□ -0.15
Usp8Q80U87 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp8Q80U87 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp8Q80U87 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.11□□□□□ -0.15
Usp8Q80U87 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Gm6973-201ENSMUST00000117080 721 ntBASIC14.11□□□□□ -0.15
Usp8Q80U87 Gm11779-201ENSMUST00000118541 368 ntBASIC14.11□□□□□ -0.15
Usp8Q80U87 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Gm15467-201ENSMUST00000120582 445 ntBASIC14.11□□□□□ -0.15
Usp8Q80U87 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Gm10175-201ENSMUST00000086013 645 ntBASIC14.11□□□□□ -0.15
Usp8Q80U87 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp8Q80U87 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp8Q80U87 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp8Q80U87 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp8Q80U87 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gm11025-201ENSMUST00000140773 466 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gm18737-201ENSMUST00000173594 937 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp8Q80U87 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp8Q80U87 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.1□□□□□ -0.15
Usp8Q80U87 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp8Q80U87 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp8Q80U87 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp8Q80U87 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp8Q80U87 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp8Q80U87 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.09□□□□□ -0.15
Usp8Q80U87 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms