Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm15823-201ENSMUST00000064305 670 ntBASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.78□□□□□ -0.2
Pcdh19Q80TF3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdh19Q80TF3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh19Q80TF3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Gm18018-201ENSMUST00000198273 408 ntBASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Gm9794-201ENSMUST00000202370 423 ntBASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh19Q80TF3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm14928-201ENSMUST00000120198 477 ntBASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm17795-201ENSMUST00000214505 757 ntBASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh19Q80TF3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms