Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 AA619741-201ENSMUST00000195095 646 ntBASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm45453-201ENSMUST00000211758 853 ntBASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.39■□□□□ 0.22
Smarcc2Q6PDG5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gm27533-201ENSMUST00000183800 152 ntBASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcc2Q6PDG5 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Smarcc2Q6PDG5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Gm14767-201ENSMUST00000121559 586 ntBASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcc2Q6PDG5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms