Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Smarcd3Q6P9Z1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd3Q6P9Z1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcd3Q6P9Z1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Rpph1-201ENSMUST00000175096 319 ntBASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcd3Q6P9Z1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Gm44492-201ENSMUST00000197012 141 ntBASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Smarcd3Q6P9Z1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm11543-201ENSMUST00000120758 370 ntBASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd3Q6P9Z1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms