Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VcanQ62059 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Gm11597-201ENSMUST00000121423 964 ntBASIC12.91□□□□□ -0.34
VcanQ62059 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.91□□□□□ -0.34
VcanQ62059 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.91□□□□□ -0.34
VcanQ62059 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.91□□□□□ -0.34
VcanQ62059 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.91□□□□□ -0.34
VcanQ62059 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.91□□□□□ -0.34
VcanQ62059 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VcanQ62059 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.91□□□□□ -0.34
VcanQ62059 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VcanQ62059 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.91□□□□□ -0.34
VcanQ62059 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcanQ62059 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.9□□□□□ -0.34
VcanQ62059 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.9□□□□□ -0.34
VcanQ62059 Gm19208-201ENSMUST00000213861 912 ntBASIC12.9□□□□□ -0.34
VcanQ62059 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.9□□□□□ -0.34
VcanQ62059 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.9□□□□□ -0.34
VcanQ62059 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcanQ62059 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.9□□□□□ -0.34
VcanQ62059 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.9□□□□□ -0.35
VcanQ62059 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
VcanQ62059 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.9□□□□□ -0.35
VcanQ62059 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.89□□□□□ -0.35
VcanQ62059 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VcanQ62059 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VcanQ62059 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.89□□□□□ -0.35
VcanQ62059 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VcanQ62059 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.89□□□□□ -0.35
VcanQ62059 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Gm11675-201ENSMUST00000121873 832 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.89□□□□□ -0.35
VcanQ62059 Gm23699-201ENSMUST00000158835 135 ntBASIC12.89□□□□□ -0.35
VcanQ62059 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.89□□□□□ -0.35
VcanQ62059 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Gm10268-201ENSMUST00000085340 555 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms