Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
DhhQ61488 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Gm12428-201ENSMUST00000119844 727 ntBASIC12.36□□□□□ -0.43
DhhQ61488 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.36□□□□□ -0.43
DhhQ61488 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.36□□□□□ -0.43
DhhQ61488 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
DhhQ61488 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
DhhQ61488 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
DhhQ61488 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
DhhQ61488 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DhhQ61488 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DhhQ61488 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Gm27533-201ENSMUST00000183800 152 ntBASIC12.35□□□□□ -0.43
DhhQ61488 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.35□□□□□ -0.43
DhhQ61488 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.35□□□□□ -0.43
DhhQ61488 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.35□□□□□ -0.43
DhhQ61488 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.35□□□□□ -0.43
DhhQ61488 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
DhhQ61488 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.35□□□□□ -0.43
DhhQ61488 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.35□□□□□ -0.43
DhhQ61488 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
DhhQ61488 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
DhhQ61488 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhhQ61488 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DhhQ61488 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
DhhQ61488 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
DhhQ61488 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.34□□□□□ -0.43
DhhQ61488 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.34□□□□□ -0.43
DhhQ61488 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Gm15653-201ENSMUST00000119247 907 ntBASIC12.34□□□□□ -0.43
DhhQ61488 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Mir1897-201ENSMUST00000122581 272 ntBASIC12.34□□□□□ -0.43
DhhQ61488 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.34□□□□□ -0.43
DhhQ61488 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.34□□□□□ -0.43
DhhQ61488 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.34□□□□□ -0.43
DhhQ61488 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.34□□□□□ -0.43
DhhQ61488 Shd-206ENSMUST00000225145 998 ntBASIC12.34□□□□□ -0.43
DhhQ61488 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.34□□□□□ -0.43
DhhQ61488 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhhQ61488 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms