Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Six4Q61321 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Six4Q61321 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Six4Q61321 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.16□□□□□ -0.14
Six4Q61321 Mir7684-201ENSMUST00000183858 60 ntBASIC14.16□□□□□ -0.14
Six4Q61321 Mir8102-201ENSMUST00000184148 139 ntBASIC14.16□□□□□ -0.14
Six4Q61321 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Six4Q61321 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Six4Q61321 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.16□□□□□ -0.14
Six4Q61321 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Gm12585-201ENSMUST00000117307 290 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Gm14719-201ENSMUST00000121891 340 ntBASIC14.15□□□□□ -0.14
Six4Q61321 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Gm29667-201ENSMUST00000190817 490 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Gm10766-202ENSMUST00000194123 606 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.15□□□□□ -0.14
Six4Q61321 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.15□□□□□ -0.14
Six4Q61321 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.15□□□□□ -0.14
Six4Q61321 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Six4Q61321 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Six4Q61321 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.15□□□□□ -0.14
Six4Q61321 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Six4Q61321 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six4Q61321 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Six4Q61321 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Six4Q61321 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Six4Q61321 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Six4Q61321 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.14□□□□□ -0.15
Six4Q61321 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.14□□□□□ -0.15
Six4Q61321 Gm29741-201ENSMUST00000192667 421 ntBASIC14.14□□□□□ -0.15
Six4Q61321 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.14□□□□□ -0.15
Six4Q61321 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.14□□□□□ -0.15
Six4Q61321 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Six4Q61321 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Six4Q61321 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six4Q61321 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms