Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cln3Q61124 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Mir1247-201ENSMUST00000116706 82 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm5187-201ENSMUST00000117317 991 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 Proscos-202ENSMUST00000178990 666 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Gm27572-201ENSMUST00000183702 255 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Gm42550-201ENSMUST00000201553 960 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Gm24447-201ENSMUST00000083977 338 ntBASIC15.31■□□□□ 0.04
Cln3Q61124 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cln3Q61124 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cln3Q61124 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cln3Q61124 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.3■□□□□ 0.04
Cln3Q61124 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.3■□□□□ 0.04
Cln3Q61124 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.3■□□□□ 0.04
Cln3Q61124 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.3■□□□□ 0.04
Cln3Q61124 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.3■□□□□ 0.04
Cln3Q61124 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cln3Q61124 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cln3Q61124 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cln3Q61124 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.29■□□□□ 0.04
Cln3Q61124 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Gm12384-201ENSMUST00000119228 919 ntBASIC15.29■□□□□ 0.04
Cln3Q61124 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.29■□□□□ 0.04
Cln3Q61124 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Cln3Q61124 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.29■□□□□ 0.04
Cln3Q61124 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cln3Q61124 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.29■□□□□ 0.04
Cln3Q61124 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms