Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm11667-201ENSMUST00000119828 486 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm43378-201ENSMUST00000199336 582 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.57□□□□□ -0.24
Col12a1Q60847 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm14350-201ENSMUST00000116642 640 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col12a1Q60847 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Col12a1Q60847 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.57□□□□□ -0.24
Col12a1Q60847 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.56□□□□□ -0.24
Col12a1Q60847 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm14726-201ENSMUST00000120623 896 ntBASIC13.56□□□□□ -0.24
Col12a1Q60847 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm45118-201ENSMUST00000208928 825 ntBASIC13.56□□□□□ -0.24
Col12a1Q60847 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col12a1Q60847 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col12a1Q60847 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.55□□□□□ -0.24
Col12a1Q60847 AA914427-201ENSMUST00000193194 1166 ntBASIC13.55□□□□□ -0.24
Col12a1Q60847 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.55□□□□□ -0.24
Col12a1Q60847 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col12a1Q60847 Gm38317-201ENSMUST00000195564 343 ntBASIC13.55□□□□□ -0.24
Col12a1Q60847 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col12a1Q60847 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col12a1Q60847 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms