Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Shroom1Q5SX79 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.96□□□□□ -0.02
Shroom1Q5SX79 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shroom1Q5SX79 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gm15957-201ENSMUST00000118893 974 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gm12091-201ENSMUST00000146791 830 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shroom1Q5SX79 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm11478-201ENSMUST00000117851 599 ntBASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm43433-201ENSMUST00000196573 481 ntBASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm43438-201ENSMUST00000198133 379 ntBASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm45384-201ENSMUST00000210451 277 ntBASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shroom1Q5SX79 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm6912-201ENSMUST00000117218 544 ntBASIC14.93□□□□□ -0.02
Shroom1Q5SX79 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms