Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps54Q5SPW0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps54Q5SPW0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps54Q5SPW0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Vps54Q5SPW0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Vps54Q5SPW0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Gm28760-201ENSMUST00000185995 736 ntBASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Gm7063-201ENSMUST00000186840 981 ntBASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps54Q5SPW0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.82■□□□□ 0.28
Vps54Q5SPW0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps54Q5SPW0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps54Q5SPW0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms