Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm14832-201ENSMUST00000121289 322 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Snora73b-201ENSMUST00000083419 205 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gm12990-201ENSMUST00000120372 468 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 CT485607.1-201ENSMUST00000216100 85 ntBASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc2Q4U2R1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm20632-201ENSMUST00000176760 2427 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm9347-201ENSMUST00000211473 1607 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm12266-201ENSMUST00000120311 962 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm32025-201ENSMUST00000217960 307 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Gm42473-201ENSMUST00000201056 2291 ntBASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc2Q4U2R1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Gm15881-201ENSMUST00000148792 942 ntBASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Mir7076-201ENSMUST00000183519 74 ntBASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Ighv1-86-201ENSMUST00000200562 353 ntBASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Gm18974-201ENSMUST00000221478 1031 ntBASIC8.09□□□□□ -1.12
Herc2Q4U2R1 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Herc2Q4U2R1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc2Q4U2R1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms