Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cnga4Q3UW12 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.27□□□□□ -0.12
Cnga4Q3UW12 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cnga4Q3UW12 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cnga4Q3UW12 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cnga4Q3UW12 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cnga4Q3UW12 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Gm10275-202ENSMUST00000168697 495 ntBASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Gm10275-201ENSMUST00000092620 635 ntBASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cnga4Q3UW12 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cnga4Q3UW12 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Gm10154-201ENSMUST00000084445 354 ntBASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cnga4Q3UW12 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms