Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fam196aQ3USH1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fam196aQ3USH1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.02□□□□□ -0.16
Fam196aQ3USH1 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Mir686-201ENSMUST00000102174 109 ntBASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Gm13461-201ENSMUST00000120980 662 ntBASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Gm16505-201ENSMUST00000179981 232 ntBASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
Fam196aQ3USH1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms