Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm6888-201ENSMUST00000221983 706 ntBASIC11.72□□□□□ -0.53
Znf48Q3US17 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Znf48Q3US17 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.72□□□□□ -0.53
Znf48Q3US17 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.72□□□□□ -0.53
Znf48Q3US17 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Znf48Q3US17 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Znf48Q3US17 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Gm7730-201ENSMUST00000212486 454 ntBASIC11.71□□□□□ -0.53
Znf48Q3US17 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.71□□□□□ -0.53
Znf48Q3US17 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.71□□□□□ -0.53
Znf48Q3US17 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Znf48Q3US17 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Znf48Q3US17 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.71□□□□□ -0.54
Znf48Q3US17 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Znf48Q3US17 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.71□□□□□ -0.54
Znf48Q3US17 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Znf48Q3US17 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.7□□□□□ -0.54
Znf48Q3US17 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gm12813-201ENSMUST00000119615 902 ntBASIC11.7□□□□□ -0.54
Znf48Q3US17 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.7□□□□□ -0.54
Znf48Q3US17 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gm9824-201ENSMUST00000178707 561 ntBASIC11.7□□□□□ -0.54
Znf48Q3US17 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.7□□□□□ -0.54
Znf48Q3US17 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Znf48Q3US17 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Znf48Q3US17 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms