Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3KNL4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3KNL4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Q3KNL4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3KNL4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Q3KNL4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Q3KNL4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Q3KNL4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Q3KNL4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Q3KNL4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.8□□□□□ -0.2
Q3KNL4 Gm18737-201ENSMUST00000173594 937 ntBASIC13.8□□□□□ -0.2
Q3KNL4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.8□□□□□ -0.2
Q3KNL4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.8□□□□□ -0.2
Q3KNL4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Q3KNL4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Q3KNL4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.79□□□□□ -0.2
Q3KNL4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.79□□□□□ -0.2
Q3KNL4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.79□□□□□ -0.2
Q3KNL4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.79□□□□□ -0.2
Q3KNL4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Q3KNL4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Q3KNL4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.79□□□□□ -0.2
Q3KNL4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.79□□□□□ -0.2
Q3KNL4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Q3KNL4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Q3KNL4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Q3KNL4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.78□□□□□ -0.2
Q3KNL4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.78□□□□□ -0.2
Q3KNL4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.78□□□□□ -0.2
Q3KNL4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Q3KNL4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.78□□□□□ -0.2
Q3KNL4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms