Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.56□□□□□ -0.56
Trim63Q38HM4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim63Q38HM4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim63Q38HM4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.54□□□□□ -0.56
Trim63Q38HM4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.54□□□□□ -0.56
Trim63Q38HM4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.54□□□□□ -0.56
Trim63Q38HM4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim63Q38HM4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim63Q38HM4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms