Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 AC132433.1-201ENSMUST00000221553 1101 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.76□□□□□ -0.21
Col9a1Q05722 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.76□□□□□ -0.21
Col9a1Q05722 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col9a1Q05722 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col9a1Q05722 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm11964-201ENSMUST00000120982 444 ntBASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC13.75□□□□□ -0.21
Col9a1Q05722 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.75□□□□□ -0.21
Col9a1Q05722 CT025525.1-201ENSMUST00000226325 1054 ntBASIC13.75□□□□□ -0.21
Col9a1Q05722 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.75□□□□□ -0.21
Col9a1Q05722 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.75□□□□□ -0.21
Col9a1Q05722 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col9a1Q05722 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.75□□□□□ -0.21
Col9a1Q05722 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm12795-201ENSMUST00000117594 539 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm25653-201ENSMUST00000158473 138 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm7902-201ENSMUST00000198842 947 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col9a1Q05722 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 App-207ENSMUST00000227737 2827 ntBASIC13.74□□□□□ -0.21
Col9a1Q05722 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col9a1Q05722 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms