Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.45□□□□□ -0.1
Sox9Q04887 Gm6334-201ENSMUST00000207083 228 ntBASIC14.45□□□□□ -0.1
Sox9Q04887 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.45□□□□□ -0.1
Sox9Q04887 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox9Q04887 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox9Q04887 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox9Q04887 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sox9Q04887 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Gm22902-201ENSMUST00000158488 302 ntBASIC14.44□□□□□ -0.1
Sox9Q04887 Gm27772-201ENSMUST00000184900 187 ntBASIC14.44□□□□□ -0.1
Sox9Q04887 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.44□□□□□ -0.1
Sox9Q04887 Olfr284-202ENSMUST00000206647 966 ntBASIC14.44□□□□□ -0.1
Sox9Q04887 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sox9Q04887 Gm5363-201ENSMUST00000211927 938 ntBASIC14.44□□□□□ -0.1
Sox9Q04887 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox9Q04887 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.44□□□□□ -0.1
Sox9Q04887 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox9Q04887 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 BC037039-201ENSMUST00000192003 2205 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox9Q04887 Gm12997-201ENSMUST00000120207 640 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox9Q04887 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Proscos-202ENSMUST00000178990 666 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Gm2383-201ENSMUST00000181461 807 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox9Q04887 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox9Q04887 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.43□□□□□ -0.1
Sox9Q04887 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox9Q04887 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox9Q04887 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.42□□□□□ -0.1
Sox9Q04887 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox9Q04887 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox9Q04887 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox9Q04887 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms