Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm8810-201ENSMUST00000172895 754 ntBASIC17.5■□□□□ 0.39
Smarcc1P97496 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarcc1P97496 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.5■□□□□ 0.39
Smarcc1P97496 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcc1P97496 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.5■□□□□ 0.39
Smarcc1P97496 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcc1P97496 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Gm14723-201ENSMUST00000118686 215 ntBASIC17.49■□□□□ 0.39
Smarcc1P97496 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Gm9823-201ENSMUST00000051212 327 ntBASIC17.49■□□□□ 0.39
Smarcc1P97496 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smarcc1P97496 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcc1P97496 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcc1P97496 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.48■□□□□ 0.39
Smarcc1P97496 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.48■□□□□ 0.39
Smarcc1P97496 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarcc1P97496 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcc1P97496 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Carlr-201ENSMUST00000181515 2574 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm27331-201ENSMUST00000183705 60 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm19184-201ENSMUST00000196798 928 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.47■□□□□ 0.39
Smarcc1P97496 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms