Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Npas1P97459 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.81□□□□□ -0.52
Npas1P97459 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Npas1P97459 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.8□□□□□ -0.52
Npas1P97459 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.8□□□□□ -0.52
Npas1P97459 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Npas1P97459 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.8□□□□□ -0.52
Npas1P97459 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.8□□□□□ -0.52
Npas1P97459 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.8□□□□□ -0.52
Npas1P97459 Gm17807-201ENSMUST00000186869 298 ntBASIC11.8□□□□□ -0.52
Npas1P97459 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.8□□□□□ -0.52
Npas1P97459 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Npas1P97459 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Npas1P97459 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.8□□□□□ -0.52
Npas1P97459 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Npas1P97459 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.8□□□□□ -0.52
Npas1P97459 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npas1P97459 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Npas1P97459 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Gm14859-201ENSMUST00000117752 357 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.79□□□□□ -0.52
Npas1P97459 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Npas1P97459 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Gm6089-201ENSMUST00000197666 938 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Npas1P97459 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npas1P97459 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.79□□□□□ -0.52
Npas1P97459 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms