Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps45P97390 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.52□□□□□ -0.08
Vps45P97390 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vps45P97390 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.52□□□□□ -0.08
Vps45P97390 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.52□□□□□ -0.08
Vps45P97390 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Vps45P97390 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps45P97390 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Vps45P97390 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps45P97390 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.52□□□□□ -0.09
Vps45P97390 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps45P97390 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.52□□□□□ -0.09
Vps45P97390 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps45P97390 Gm45384-201ENSMUST00000210451 277 ntBASIC14.52□□□□□ -0.09
Vps45P97390 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps45P97390 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps45P97390 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vps45P97390 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps45P97390 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Vps45P97390 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Vps45P97390 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.51□□□□□ -0.09
Vps45P97390 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps45P97390 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Gm15957-201ENSMUST00000118893 974 ntBASIC14.51□□□□□ -0.09
Vps45P97390 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps45P97390 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps45P97390 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps45P97390 Gm6218-201ENSMUST00000219812 628 ntBASIC14.51□□□□□ -0.09
Vps45P97390 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vps45P97390 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vps45P97390 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps45P97390 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps45P97390 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps45P97390 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Vps45P97390 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vps45P97390 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps45P97390 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.5□□□□□ -0.09
Vps45P97390 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.5□□□□□ -0.09
Vps45P97390 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Vps45P97390 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.5□□□□□ -0.09
Vps45P97390 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps45P97390 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps45P97390 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.5□□□□□ -0.09
Vps45P97390 AA619741-201ENSMUST00000195095 646 ntBASIC14.5□□□□□ -0.09
Vps45P97390 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.5□□□□□ -0.09
Vps45P97390 Dupd1-202ENSMUST00000224735 548 ntBASIC14.5□□□□□ -0.09
Vps45P97390 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.5□□□□□ -0.09
Vps45P97390 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.5□□□□□ -0.09
Vps45P97390 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps45P97390 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms