Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim43bP86448 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim43bP86448 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim43bP86448 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim43bP86448 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.46□□□□□ -0.09
Trim43bP86448 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim43bP86448 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Gm11745-201ENSMUST00000121669 448 ntBASIC14.46□□□□□ -0.09
Trim43bP86448 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Trim43bP86448 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
Trim43bP86448 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.46□□□□□ -0.09
Trim43bP86448 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim43bP86448 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim43bP86448 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.46□□□□□ -0.09
Trim43bP86448 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trim43bP86448 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim43bP86448 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.46□□□□□ -0.09
Trim43bP86448 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.46□□□□□ -0.1
Trim43bP86448 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim43bP86448 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm25287-201ENSMUST00000103846 110 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Gm22918-201ENSMUST00000103855 110 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim43bP86448 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim43bP86448 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm8584-201ENSMUST00000171982 758 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43bP86448 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43bP86448 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm44335-201ENSMUST00000196879 141 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Gm44297-201ENSMUST00000198304 141 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Gm44346-201ENSMUST00000198851 141 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.45□□□□□ -0.1
Trim43bP86448 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim43bP86448 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim43bP86448 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim43bP86448 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim43bP86448 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim43bP86448 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim43bP86448 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43bP86448 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim43bP86448 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms