Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.18■□□□□ 0.02
PrkcbP68404 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PrkcbP68404 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.18■□□□□ 0.02
PrkcbP68404 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PrkcbP68404 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrkcbP68404 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PrkcbP68404 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.17■□□□□ 0.02
PrkcbP68404 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PrkcbP68404 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PrkcbP68404 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.17■□□□□ 0.02
PrkcbP68404 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PrkcbP68404 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PrkcbP68404 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.17■□□□□ 0.02
PrkcbP68404 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PrkcbP68404 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.17■□□□□ 0.02
PrkcbP68404 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkcbP68404 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Gm13385-201ENSMUST00000121089 220 ntBASIC15.16■□□□□ 0.02
PrkcbP68404 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Gm28631-201ENSMUST00000190740 334 ntBASIC15.16■□□□□ 0.02
PrkcbP68404 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.16■□□□□ 0.02
PrkcbP68404 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.16■□□□□ 0.02
PrkcbP68404 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.16■□□□□ 0.02
PrkcbP68404 Mir497b-201ENSMUST00000093601 125 ntBASIC15.16■□□□□ 0.02
PrkcbP68404 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.16■□□□□ 0.02
PrkcbP68404 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
PrkcbP68404 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.16■□□□□ 0.02
PrkcbP68404 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.16■□□□□ 0.02
PrkcbP68404 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PrkcbP68404 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrkcbP68404 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PrkcbP68404 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PrkcbP68404 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PrkcbP68404 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PrkcbP68404 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PrkcbP68404 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PrkcbP68404 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Gm6912-201ENSMUST00000117218 544 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrkcbP68404 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.15■□□□□ 0.02
PrkcbP68404 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.15■□□□□ 0.02
PrkcbP68404 Gm8927-201ENSMUST00000181978 981 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PrkcbP68404 Gm29741-201ENSMUST00000192667 421 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 Gm3222-201ENSMUST00000071282 990 ntBASIC15.15■□□□□ 0.02
PrkcbP68404 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PrkcbP68404 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PrkcbP68404 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms