Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Vamp3P63024 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Vamp3P63024 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Vamp3P63024 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Vamp3P63024 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm43034-201ENSMUST00000198678 1364 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Vamp3P63024 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.69□□□□□ -0.7
Vamp3P63024 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Vamp3P63024 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.69□□□□□ -0.7
Vamp3P63024 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Vamp3P63024 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.69□□□□□ -0.7
Vamp3P63024 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Vamp3P63024 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vamp3P63024 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.69□□□□□ -0.7
Vamp3P63024 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Vamp3P63024 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.68□□□□□ -0.7
Vamp3P63024 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Gm10052-201ENSMUST00000168019 960 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 Gm18671-201ENSMUST00000214826 683 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 Gm7729-201ENSMUST00000050143 801 ntBASIC10.68□□□□□ -0.7
Vamp3P63024 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Vamp3P63024 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vamp3P63024 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms